6LFL
Crystal structure of a class A GPCR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.300, 108.460, 82.600 |
Unit cell angles | 90.00, 91.16, 90.00 |
Refinement procedure
Resolution | 45.330 - 3.200 |
R-factor | 0.233 |
Rwork | 0.231 |
R-free | 0.26400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lwe |
RMSD bond length | 0.008 |
RMSD bond angle | 1.000 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.330 | 45.330 | 3.390 |
High resolution limit [Å] | 3.200 | 9.600 | 3.200 |
Rmerge | 0.078 | 0.599 | |
Rmeas | 0.081 | 0.644 | |
Number of reflections | 12047 | 468 | 1884 |
<I/σ(I)> | 10.06 | 35.43 | 1.4 |
Completeness [%] | 99.8 | 99.4 | 99.5 |
Redundancy | 10.78 | 14.224 | 7.034 |
CC(1/2) | 0.996 | 0.996 | 0.545 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 100mM HEPES pH7.0, 32% PEG 400, 50-150 mM Sodium tartrate dibasic dihydrate salt |