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6KB6

X-ray structure of human PPARalpha ligand binding domain-tetradecylthioacetic acid (TTA) co-crystals obtained by delipidation and cross-seeding

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE AR-NE3A
Synchrotron sitePhoton Factory
BeamlineAR-NE3A
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-11
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.00000
Spacegroup nameP 1 21 1
Unit cell lengths44.755, 61.391, 52.941
Unit cell angles90.00, 106.47, 90.00
Refinement procedure
Resolution32.687 - 1.431
R-factor0.1736
Rwork0.173
R-free0.19300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3vi8
Data reduction softwareXDS
Data scaling softwareAimless (0.5.21)
Phasing softwarePHASER (2.7.16)
Refinement softwarePHENIX (1.11.1-2575-000)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]42.92042.9201.460
High resolution limit [Å]1.4307.7001.430
Rmerge0.0380.0230.340
Rmeas0.0450.0280.405
Rpim0.0240.0150.217
Number of reflections502873372397
<I/σ(I)>17.9503.4
Completeness [%]99.197.393
Redundancy3.43.33.3
CC(1/2)0.9990.9990.895
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2770.1 M HEPES (pH 7.0), 25 %(w/v) PEG3350

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