6HJX
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) 7'C pore mutant (L238C) in complex with nanobody 72
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-05-01 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 0.91958 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 96.251, 156.277, 102.496 |
Unit cell angles | 90.00, 102.88, 90.00 |
Refinement procedure
Resolution | 47.587 - 2.500 |
R-factor | 0.2063 |
Rwork | 0.204 |
R-free | 0.24510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yoe |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.840 | 2.640 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.067 | 0.948 |
Rmeas | 0.079 | 1.128 |
Rpim | 0.042 | 0.607 |
Number of reflections | 101800 | 14853 |
<I/σ(I)> | 14.8 | 1.3 |
Completeness [%] | 99.9 | |
Redundancy | 3.5 | |
CC(1/2) | 0.999 | 0.475 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 100 mM MES (pH 6.5) and 30% PEG400 |