Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6F59

Crystal structure of human Brachyury (T) G177D variant in complex with DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-08-04
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.92
Spacegroup nameP 43 2 2
Unit cell lengths75.270, 75.270, 288.468
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution72.831 - 2.151
R-factor0.2229
Rwork0.221
R-free0.25200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xbr
RMSD bond length0.008
RMSD bond angle0.963
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]144.2302.210
High resolution limit [Å]2.1502.150
Rmerge0.1142.618
Rmeas0.1172.677
Rpim0.0240.550
Number of reflections463873687
<I/σ(I)>12.91.2
Completeness [%]99.998.7
Redundancy25.523.1
CC(1/2)0.9970.777
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27756% MPD -- 0.1M SPG pH 6.0

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon