6EUV
Structure of the midlink and cap-binding domains of influenza A polymerase PB2 subunit with a bound azaindole cap-binding inhibitor (VX-787)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-03 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.966 |
Spacegroup name | P 1 |
Unit cell lengths | 54.490, 80.320, 92.320 |
Unit cell angles | 89.54, 107.12, 99.11 |
Refinement procedure
Resolution | 43.350 - 2.700 |
R-factor | 0.24469 |
Rwork | 0.243 |
R-free | 0.28168 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6eux |
RMSD bond length | 0.010 |
RMSD bond angle | 1.491 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.770 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.091 | 0.698 |
Number of reflections | 38468 | |
<I/σ(I)> | 5.99 | 1.02 |
Completeness [%] | 94.8 | 94.2 |
Redundancy | 1.69 | 1.55 |
CC(1/2) | 0.991 | 0.508 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | Crystals were obtained by mixing protein at 16 mg per mL mixed with 2 mM VX-787 in 0.1 M MES pH6, 0.7 M sodium formate pH 6. |