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6ET9

Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-27
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.38546
Spacegroup nameP 21 21 21
Unit cell lengths106.617, 144.014, 230.585
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.387 - 2.750
R-factor0.1919
Rwork0.190
R-free0.22470
RMSD bond length0.008
RMSD bond angle0.825
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.9002.900
High resolution limit [Å]2.7502.750
Rmerge0.2791.249
Rpim0.0790.354
Number of reflections9296513426
<I/σ(I)>8.62.1
Completeness [%]100.0100
Redundancy13.413.3
CC(1/2)0.9930.324
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5293Crystallization was done under air using the sitting drop method (in a 24-well junior clover plate from Jena Bioscience). The crystallization reservoir contained 100 mM Tris/HCl pH 8.0, 25-28% v/v pentaerythritol ethoxylate (15/4 EO/OH, average Molecular weight, about 797 Da) and 50 mM MgCl2. Crystallization drop contained 1 to 2 ul of the purified fraction containing Thiolase/HMGCS complex at 50-60 mg/ml (pure at 60%) with 10 mM Tb-Xo4 mixed with 1 ul of precipitant.

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PDB entries from 2024-05-15

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