6ET9
Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-27 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.38546 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 106.617, 144.014, 230.585 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.387 - 2.750 |
R-factor | 0.1919 |
Rwork | 0.190 |
R-free | 0.22470 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.825 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.900 | 2.900 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.279 | 1.249 |
Rpim | 0.079 | 0.354 |
Number of reflections | 92965 | 13426 |
<I/σ(I)> | 8.6 | 2.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.4 | 13.3 |
CC(1/2) | 0.993 | 0.324 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Crystallization was done under air using the sitting drop method (in a 24-well junior clover plate from Jena Bioscience). The crystallization reservoir contained 100 mM Tris/HCl pH 8.0, 25-28% v/v pentaerythritol ethoxylate (15/4 EO/OH, average Molecular weight, about 797 Da) and 50 mM MgCl2. Crystallization drop contained 1 to 2 ul of the purified fraction containing Thiolase/HMGCS complex at 50-60 mg/ml (pure at 60%) with 10 mM Tb-Xo4 mixed with 1 ul of precipitant. |