6DUI
Crystal structure of LpxC from Pseudomonas aeruginosa in complex with PT801
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-03-08 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 |
Unit cell lengths | 35.710, 48.000, 48.130 |
Unit cell angles | 111.32, 108.56, 98.83 |
Refinement procedure
Resolution | 42.585 - 1.550 |
R-factor | 0.1517 |
Rwork | 0.150 |
R-free | 0.18840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5upg |
RMSD bond length | 0.006 |
RMSD bond angle | 0.838 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3211: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.585 | 42.585 | 1.590 |
High resolution limit [Å] | 1.550 | 6.930 | 1.550 |
Rmerge | 0.077 | 0.041 | 0.507 |
Rmeas | 0.089 | 0.047 | 0.586 |
Number of reflections | 37740 | 428 | 2694 |
<I/σ(I)> | 11.3 | 27.08 | 2.69 |
Completeness [%] | 96.4 | 97.7 | 94.4 |
Redundancy | 3.952 | 3.822 | 3.986 |
CC(1/2) | 0.997 | 0.998 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | 100mM HEPES HCl, pH 7.5, 50mM CaCl2, 4% (w/v) Propanol, 25% (w/v) PEG 3350, PsaeA.00166.a.DG15.PD00442 at 5mg/ml + 1mM ZnCl2 + 1mM BSI 108451, Cryo = 20%EG: tray 298107e10 |