6C5Q
PPARg LBD bound to SR10171
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-12 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 65.190, 65.190, 368.450 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 51.296 - 2.404 |
R-factor | 0.2502 |
Rwork | 0.249 |
R-free | 0.27680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4r06 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.559 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.25) |
Phasing software | PHASER (2.6.1) |
Refinement software | PHENIX (1.11_2567) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.690 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.322 | 4.038 |
Rmeas | 0.330 | 4.132 |
Rpim | 0.067 | 0.818 |
Total number of observations | 39175 | |
Number of reflections | 19263 | 1943 |
<I/σ(I)> | 7.6 | 0.7 |
Completeness [%] | 99.4 | 99.2 |
Redundancy | 19.4 | 20.2 |
CC(1/2) | 0.995 | 0.294 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 4M ammonium acetate, O.1M bis-tris propane 7.0 |