6BQ8
Joint X-ray/neutron structure of PKG II CNB-B domain in complex with 8-pCPT-cGMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 293 |
Detector technology | IMAGE PLATE |
Collection date | 2015-11-01 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.650, 51.300, 68.200 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.200 |
Rwork | 0.232 |
R-free | 0.28800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bv6 |
Data reduction software | LAUEGEN |
Data scaling software | LSCALE |
Phasing software | PHASER |
Refinement software | nCNS (1.0.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 10.000 | 2.320 | 2.060 |
High resolution limit [Å] | 2.000 | 2.200 | 2.000 |
Rmerge | 0.064 | 0.190 | 0.535 |
Number of reflections | 10492 | ||
<I/σ(I)> | 12.5 | 4.5 | 2.8 |
Completeness [%] | 97.3 | 51.9 | 97.6 |
Redundancy | 3.3 | 2.4 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 277 | 30% MPD, 20 mM SrCl2, 100 mM NaOAc pH 4.6 |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 277 | 30% MPD, 20 mM SrCl2, 100 mM NaOAc pH 4.6 |