5ZMS
Crystal structure of Zika NS3 protease in complex with 4-guanidinomethyl-phenylacetyl-Lys-Lys-Arg-H
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-01 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.330, 60.350, 214.680 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.416 - 1.800 |
R-factor | 0.2112 |
Rwork | 0.204 |
R-free | 0.25230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gpi |
RMSD bond length | 0.003 |
RMSD bond angle | 0.660 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.420 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.044 | 1.159 |
Rmeas | 0.117 | |
Rpim | 0.053 | 0.635 |
Number of reflections | 73611 | 10600 |
<I/σ(I)> | 8.8 | 1.1 |
Completeness [%] | 99.8 | 100 |
Redundancy | 4.7 | 4.1 |
CC(1/2) | 0.997 | 0.419 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293.15 | 2 M ammonium sulfate, 0.1 M sodium acetate trihydrate pH 4.6 |