5WZU
Crystal structure of human secreted phospholipase A2 group IIE with Compound 24
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | OXFORD DIFFRACTION ENHANCE ULTRA |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2014-09-29 |
Detector | OXFORD RUBY CCD |
Wavelength(s) | 1.5406 |
Spacegroup name | P 21 2 2 |
Unit cell lengths | 48.627, 60.469, 63.499 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.480 - 2.200 |
R-factor | 0.1974 |
Rwork | 0.195 |
R-free | 0.23660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wzm |
RMSD bond length | 0.014 |
RMSD bond angle | 1.581 |
Data reduction software | CrysalisPro |
Data scaling software | Aimless (0.5.28) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.480 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.097 | 0.412 |
Rmeas | 0.102 | 0.436 |
Rpim | 0.032 | 0.140 |
Number of reflections | 9973 | |
<I/σ(I)> | 20.2 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 9.9 | 9.4 |
CC(1/2) | 0.998 | 0.956 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | 2.2M Sodium chloride, 0.1M BIS-TRIS propane pH 7.0 |