5WZ2
Crystal structure of Zika virus NS5 methyltransferase bound to SAM and RNA analogue (m7GpppA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-07-13 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97907 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 75.131, 78.274, 136.380 |
Unit cell angles | 90.00, 90.10, 90.00 |
Refinement procedure
Resolution | 42.456 - 2.600 |
R-factor | 0.2048 |
Rwork | 0.202 |
R-free | 0.24680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1l9k |
RMSD bond length | 0.004 |
RMSD bond angle | 0.913 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.161 | |
Number of reflections | 24447 | |
<I/σ(I)> | 9.362 | |
Completeness [%] | 99.8 | |
Redundancy | 4.7 | |
CC(1/2) | 0.993 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 0.2 M magnesium chloride, 0.1 M HEPES pH 7.0, 20 % w/v PEG 6000 |