5W2C
Structure of human DNA polymerase kappa in complex with Lucidin-derived DNA adduct and incoming dAMPNPP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-03-10 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9792 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 63.709, 128.923, 167.705 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.010 - 2.500 |
| R-factor | 0.21217 |
| Rwork | 0.211 |
| R-free | 0.25325 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.394 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.010 | 2.640 |
| High resolution limit [Å] | 2.500 | 2.500 |
| Rmerge | 0.044 | 0.477 |
| Number of reflections | 48405 | 7002 |
| <I/σ(I)> | 16.3 | 2.7 |
| Completeness [%] | 99.5 | 99.7 |
| Redundancy | 4.4 | 4.5 |
| CC(1/2) | 0.999 | 0.937 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295.15 | 25-30% PEG400, 0.2M ammonium nitrate |






