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5W2C

Structure of human DNA polymerase kappa in complex with Lucidin-derived DNA adduct and incoming dAMPNPP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2017-03-10
DetectorADSC QUANTUM 315
Wavelength(s)0.9792
Spacegroup nameP 21 21 21
Unit cell lengths63.709, 128.923, 167.705
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.010 - 2.500
R-factor0.21217
Rwork0.211
R-free0.25325
RMSD bond length0.009
RMSD bond angle1.394
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0102.640
High resolution limit [Å]2.5002.500
Rmerge0.0440.477
Number of reflections484057002
<I/σ(I)>16.32.7
Completeness [%]99.599.7
Redundancy4.44.5
CC(1/2)0.9990.937
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP295.1525-30% PEG400, 0.2M ammonium nitrate

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