Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VS6

Structure of DUB complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-16
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9792
Spacegroup nameP 1 21 1
Unit cell lengths75.800, 68.520, 80.310
Unit cell angles90.00, 96.17, 90.00
Refinement procedure
Resolution58.005 - 2.270
R-factor0.1842
Rwork0.182
R-free0.23210
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.856
Data reduction softwareXDS
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]58.01058.0202.310
High resolution limit [Å]2.2706.1602.270
Rmeas0.1470.0331.148
Rpim0.0760.0180.593
Total number of observations139898
Number of reflections37847
<I/σ(I)>1129.31.5
Completeness [%]99.599.399.5
Redundancy3.73.63.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293PEG 3350, NaFormate

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon