Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VQK

X-ray co-structure of nuclear receptor ROR-gammat Ligand Binding Domain with a inverse agonist and SRC2 peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2011-06-23
DetectorPSI PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 41 21 2
Unit cell lengths64.725, 64.725, 159.322
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000 - 3.100
R-factor0.196
Rwork0.194
R-free0.24600
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.980
Data reduction softwared*TREK (9.9.8.8L)
Data scaling softwared*TREK (9.9.8.8L)
Phasing softwarePHENIX (1.7_650)
Refinement softwareBUSTER (2.11.7)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.7703.210
High resolution limit [Å]3.1003.100
Rmerge0.1100.635
Number of reflections6633636
<I/σ(I)>11.92.9
Completeness [%]99.999.69
Redundancy11.312.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7298PEG 4000 (2-8%), NACL 0.5M, PIPES (0.1M), PH 7.0

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon