5VQK
X-ray co-structure of nuclear receptor ROR-gammat Ligand Binding Domain with a inverse agonist and SRC2 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-06-23 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 64.725, 64.725, 159.322 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 3.100 |
R-factor | 0.196 |
Rwork | 0.194 |
R-free | 0.24600 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.980 |
Data reduction software | d*TREK (9.9.8.8L) |
Data scaling software | d*TREK (9.9.8.8L) |
Phasing software | PHENIX (1.7_650) |
Refinement software | BUSTER (2.11.7) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.770 | 3.210 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.110 | 0.635 |
Number of reflections | 6633 | 636 |
<I/σ(I)> | 11.9 | 2.9 |
Completeness [%] | 99.9 | 99.69 |
Redundancy | 11.3 | 12.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 4000 (2-8%), NACL 0.5M, PIPES (0.1M), PH 7.0 |