5VC4
Crystal structure of HUMAN WEE1 KINASE domain in complex with Bosutinib-isomer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-11-09 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.00 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.670, 44.250, 64.800 |
Unit cell angles | 90.00, 101.73, 90.00 |
Refinement procedure
Resolution | 33.023 - 2.100 |
R-factor | 0.1975 |
Rwork | 0.193 |
R-free | 0.24150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v5y |
RMSD bond length | 0.002 |
RMSD bond angle | 0.642 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.023 | 33.023 | 2.150 |
High resolution limit [Å] | 2.100 | 9.390 | 2.100 |
Rmerge | 0.048 | 0.022 | 0.343 |
Rmeas | 0.057 | 0.027 | 0.418 |
Number of reflections | 16101 | 186 | 1172 |
<I/σ(I)> | 14.37 | 35.63 | 3.24 |
Completeness [%] | 96.7 | 88.2 | 98.6 |
Redundancy | 2.999 | 2.796 | 2.956 |
CC(1/2) | 0.998 | 0.999 | 0.872 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.9 | 291 | 5.0 MG/ML WEE1, 25 mM Na/K phosphate, 1 mM DTT, 0.05 M ammonium sulfate, 0.05 M Bis-tris (pH 5.5), 7.5 % PEG 3350, 1 mM Bosutinib-isomer |