5VBR
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRDT IN COMPLEX WITH Volasertib
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-10-08 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.00 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 65.450, 31.050, 69.800 |
| Unit cell angles | 90.00, 97.09, 90.00 |
Refinement procedure
| Resolution | 69.267 - 1.900 |
| Rwork | 0.155 |
| R-free | 0.20120 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4kcx |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.014 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 69.267 | 69.267 | 1.950 |
| High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
| Rmerge | 0.078 | 0.023 | 0.417 |
| Rmeas | 0.092 | 0.028 | 0.489 |
| Number of reflections | 22421 | 283 | 1652 |
| <I/σ(I)> | 15.45 | 38.03 | 3.68 |
| Completeness [%] | 99.7 | 97.9 | 99.9 |
| Redundancy | 3.7 | 3.191 | 3.719 |
| CC(1/2) | 0.997 | 0.999 | 0.868 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 8 MG/ML BRDT, 25MM HEPES PH 7.5, 75MM SODIUM CHLORIDE, 0.5MM DTT, 50MM MES PH 6.5, 0.1M AMMONIUM, SULFATE, 15% PEG MME 5,000, 10% DMSO, 1 MM Volasertib |






