Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5V7P

Atomic structure of the eukaryotic intramembrane Ras methyltransferase ICMT (isoprenylcysteine carboxyl methyltransferase), in complex with a monobody

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]90
Detector technologyPIXEL
Collection date2015-11-09
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9790
Spacegroup nameP 21 21 21
Unit cell lengths40.554, 87.691, 147.681
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.772 - 2.300
R-factor0.2156
Rwork0.214
R-free0.24720
Structure solution methodSIRAS
RMSD bond length0.003
RMSD bond angle0.595
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHARP
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.0002.350
High resolution limit [Å]2.3002.300
Rmerge0.2000.979
Rpim0.0620.295
Number of reflections232041197
<I/σ(I)>13.32.5
Completeness [%]97.299.8
Redundancy11.211.1
CC(1/2)0.8630.547
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE29340/60% (v/v ICMT:9.9 monoacylgylcerol) 30% PEG 400 100 mM NaCl 100 mM Na HEPES, pH 7.5

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon