5UM3
Crystal structure of the V122L mutant of human UBR-box domain from UBR2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE A1 |
Synchrotron site | CHESS |
Beamline | A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-08 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.6263 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 29.177, 29.375, 66.052 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.618 - 1.198 |
R-factor | 0.139 |
Rwork | 0.137 |
R-free | 0.15830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tdd |
RMSD bond length | 0.006 |
RMSD bond angle | 0.953 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 17.620 | 1.241 |
High resolution limit [Å] | 1.198 | 1.198 |
Rmerge | 0.099 | 0.546 |
Rpim | 0.039 | 0.328 |
Number of reflections | 18167 | 1580 |
<I/σ(I)> | 17.87 | 1.61 |
Completeness [%] | 98.1 | 86.43 |
Redundancy | 7 | 3.1 |
CC(1/2) | 0.992 | 0.747 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.1 M HEPES pH 7.5 25% PEG 4000 |