Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UM3

Crystal structure of the V122L mutant of human UBR-box domain from UBR2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
Collection date2016-12-08
DetectorADSC QUANTUM 270
Wavelength(s)0.6263
Spacegroup nameP 21 21 21
Unit cell lengths29.177, 29.375, 66.052
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution17.618 - 1.198
R-factor0.139
Rwork0.137
R-free0.15830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5tdd
RMSD bond length0.006
RMSD bond angle0.953
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]17.6201.241
High resolution limit [Å]1.1981.198
Rmerge0.0990.546
Rpim0.0390.328
Number of reflections181671580
<I/σ(I)>17.871.61
Completeness [%]98.186.43
Redundancy73.1
CC(1/2)0.9920.747
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2950.1 M HEPES pH 7.5 25% PEG 4000

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon