Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UD7

Crystal Structure of Wild-Type Ig-like Domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-06-24
DetectorPSI PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 41 21 2
Unit cell lengths160.664, 160.664, 86.574
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.493 - 2.200
R-factor0.242745918946
Rwork0.241
R-free0.27748
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ud8
RMSD bond length0.009
RMSD bond angle1.010
Data reduction softwareXDS
Data scaling softwareAimless (0.5.15)
Phasing softwareMOLREP
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.49347.4902.260
High resolution limit [Å]2.2009.5902.200
Rmerge0.2660.0593.535
Number of reflections57945
<I/σ(I)>14.1
Completeness [%]100.099.3100
Redundancy25.619.727.6
CC(1/2)0.9990.9990.459
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION7.92930.2 M sodium iodide, 1.6 M ammonium sulfate, 0.1 M Tris 7.9

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon