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5TTZ

Crystal structure of Grp94 bound to isoform-selective inhibitor methyl 2-(2-(1-(4-bromobenzyl)-1H-imidazol-2-yl)ethyl)-3-chloro-4,6-dihydroxybenzoate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]80
Detector technologyCCD
Collection date2014-06-25
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths65.237, 84.420, 95.473
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.736 - 2.707
R-factor0.2076
Rwork0.199
R-free0.28550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2gfd
RMSD bond length0.010
RMSD bond angle1.272
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.740
High resolution limit [Å]2.707
Rmerge0.1210.663
Number of reflections217928
<I/σ(I)>22.11
Completeness [%]97.7
Redundancy14.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5289.15Protein at 30 mg/mL in 0.1 M Tris pH 7.5 was mixed 1:1 with mother liquor comprised of 35% PEG400, 0.1 M Tris pH 7.5, and 80 mM MgCl2. Crystals were harvested and soaked in mother liquor containing 20 mM inhibitor. A layer of glycerol was then added through which crystals were harvested and cryo-cooled in liquid nitrogen.

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PDB entries from 2026-01-21

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