5TTZ
Crystal structure of Grp94 bound to isoform-selective inhibitor methyl 2-(2-(1-(4-bromobenzyl)-1H-imidazol-2-yl)ethyl)-3-chloro-4,6-dihydroxybenzoate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 80 |
| Detector technology | CCD |
| Collection date | 2014-06-25 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 65.237, 84.420, 95.473 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.736 - 2.707 |
| R-factor | 0.2076 |
| Rwork | 0.199 |
| R-free | 0.28550 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2gfd |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.272 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.740 | |
| High resolution limit [Å] | 2.707 | |
| Rmerge | 0.121 | 0.663 |
| Number of reflections | 217928 | |
| <I/σ(I)> | 22.11 | |
| Completeness [%] | 97.7 | |
| Redundancy | 14.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 289.15 | Protein at 30 mg/mL in 0.1 M Tris pH 7.5 was mixed 1:1 with mother liquor comprised of 35% PEG400, 0.1 M Tris pH 7.5, and 80 mM MgCl2. Crystals were harvested and soaked in mother liquor containing 20 mM inhibitor. A layer of glycerol was then added through which crystals were harvested and cryo-cooled in liquid nitrogen. |






