5SB7
Tubulin-todalam-18-complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-26 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 105.148, 158.288, 179.988 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.080 - 2.100 |
R-factor | 0.2034 |
Rwork | 0.202 |
R-free | 0.23500 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lxt |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.19.1_4122) |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.080 | 48.080 | 2.150 |
High resolution limit [Å] | 2.100 | 9.390 | 2.100 |
Rmerge | 0.074 | 0.020 | 1.221 |
Rmeas | 0.077 | 0.021 | 1.271 |
Total number of observations | 2363099 | ||
Number of reflections | 174917 | 2147 | 12807 |
<I/σ(I)> | 23.92 | 84.32 | 2.15 |
Completeness [%] | 99.9 | 99 | 99.9 |
Redundancy | 13.51 | 12.596 | 12.99 |
CC(1/2) | 1.000 | 1.000 | 0.757 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine |