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5OWP

Crystal structure of glycopeptide "GVTSAfPDT*RPAP" in complex with scFv-SM3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-12
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97
Spacegroup nameP 21 21 21
Unit cell lengths35.399, 68.151, 90.358
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution90.360 - 1.850
R-factor0.19599
Rwork0.194
R-free0.25614
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5a2k
RMSD bond length0.017
RMSD bond angle1.854
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.3601.950
High resolution limit [Å]1.8501.850
Rpim0.0490.394
Number of reflections19335
<I/σ(I)>10.91.9
Completeness [%]99.799.8
Redundancy6.46.3
CC(1/2)0.9980.685
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291PEG 3350, disodium hydrogen phosphate

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