5OML
Crystal structure of Trypanosoma Brucei PEX14 N-terminal domain in complex with small molecules to investigate the water envelope
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.033 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 35.863, 116.368, 38.962 |
Unit cell angles | 90.00, 101.46, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.500 |
R-factor | 0.1776 |
Rwork | 0.176 |
R-free | 0.20210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5aon |
RMSD bond length | 0.027 |
RMSD bond angle | 2.424 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 1.540 |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.053 | 0.039 | 0.728 |
Rmeas | 0.067 | 0.048 | 0.926 |
Number of reflections | 48921 | 1085 | 6429 |
<I/σ(I)> | 9.04 | 20.53 | 1.33 |
Completeness [%] | 95.6 | 97.7 | 88.9 |
Redundancy | 2.501 | 2.594 | 2.48 |
CC(1/2) | 0.996 | 0.994 | 0.548 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.22M Li2SO4 0.1M Tris-HCl pH8.5 29% PEG 4000 |