5OJM
Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 177.350, 139.940, 191.500 |
Unit cell angles | 90.00, 102.25, 90.00 |
Refinement procedure
Resolution | 48.880 - 3.300 |
R-factor | 0.23449 |
Rwork | 0.234 |
R-free | 0.24960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4cof |
RMSD bond length | 0.009 |
RMSD bond angle | 0.710 |
Data reduction software | HKL-2000 (708c) |
Data scaling software | Aimless (0.5.25) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.880 | 3.418 |
High resolution limit [Å] | 3.300 | 3.300 |
Rmerge | 0.352 | 2.807 |
Rpim | 0.116 | 0.935 |
Number of reflections | 68852 | 6886 |
<I/σ(I)> | 7.85 | 1.08 |
Completeness [%] | 99.8 | 99.71 |
Redundancy | 10 | 9.9 |
CC(1/2) | 0.998 | 0.395 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.8 | 277.15 | 14% poly-ethylene glycol (PEG) 5000, 0.08M magnesium acetate, 0.1M sodium citrate, 1mM ethylene glycol-bis(beta-aminoethyl ether)-N,N,N',N'-tetraacetic acid (EGTA) |