5OHS
A GH31 family sulfoquinovosidase mutant D455N in complex with pNPSQ
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97951 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 104.200, 169.190, 169.690 |
Unit cell angles | 90.00, 92.80, 90.00 |
Refinement procedure
Resolution | 75.770 - 1.970 |
R-factor | 0.182 |
Rwork | 0.181 |
R-free | 0.20260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | apo |
RMSD bond length | 0.018 |
RMSD bond angle | 1.871 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 75.770 | 2.020 |
High resolution limit [Å] | 1.970 | 1.970 |
Rmerge | 0.078 | 0.965 |
Number of reflections | 411803 | 30415 |
<I/σ(I)> | 11.6 | 1.4 |
Completeness [%] | 99.8 | 100 |
Redundancy | 4.1 | 4.2 |
CC(1/2) | 0.998 | 0.558 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Protein stock at 45 mg/mL in the buffer of 50 mM NaPO4 and 500 mM NaCl is mixed with the precipitant of 0.2 M KSCN, 21% PEG3350, 0.1 M bis-Tris propane pH 6.5, at a ratio of 1.2: 1. |