5O33
A structure of the GEF Kalirin DH1 domain in complex with the small GTPase Rac1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-11 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 63.255, 63.255, 346.704 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 54.780 - 1.640 |
R-factor | 0.2084 |
Rwork | 0.207 |
R-free | 0.23980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nz8 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.072 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 57.780 |
High resolution limit [Å] | 1.640 |
Rmerge | 0.097 |
Number of reflections | 52137 |
<I/σ(I)> | 11.21 |
Completeness [%] | 100.0 |
Redundancy | 18.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 293 | 0.1M citrate pH4.2, 0.2M sodium chloride, 18% (W/V) PEG 8000 |