5O1S
Dimethyl fumarate is an allosteric covalent inhibitor of the p90 ribosomal S6 kinases
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-07-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 46.951, 46.951, 291.865 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.355 - 1.900 |
R-factor | 0.2088 |
Rwork | 0.207 |
R-free | 0.24140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qr8 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.351 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2152: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.000 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.549 | |
Rpim | 0.013 | 0.321 |
Number of reflections | 27094 | |
<I/σ(I)> | 23.3 | 2.3 |
Completeness [%] | 99.4 | 96.5 |
Redundancy | 8.6 | |
CC(1/2) | 1.000 | 0.560 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 292 | 0.1 M Bis-Tris pH 6.5 25 % (w/v) polyethylene glycol (PEG) 3350 0.05 M NaF |