5O14
Co-crystal structure of a cross-reactive bactericidal human antibody targeting meningococcal vaccine antigen factor H binding protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.977175 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.822, 163.951, 110.656 |
Unit cell angles | 90.00, 97.70, 90.00 |
Refinement procedure
Resolution | 48.913 - 2.195 |
R-factor | 0.1943 |
Rwork | 0.192 |
R-free | 0.24960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ypv 4YPG and 4JQI |
RMSD bond length | 0.006 |
RMSD bond angle | 0.978 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.26) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.920 | 48.920 | 2.240 |
High resolution limit [Å] | 2.195 | 10.750 | 2.200 |
Rmerge | 0.219 | 0.054 | 1.388 |
Rmeas | 0.242 | 0.060 | 1.580 |
Rpim | 0.101 | 0.025 | 0.737 |
Number of reflections | 74270 | ||
<I/σ(I)> | 6.7 | ||
Completeness [%] | 96.4 | 97.8 | 68.1 |
Redundancy | 5.6 | 5.3 | 4.3 |
CC(1/2) | 0.987 | 0.998 | 0.263 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 298 | 0.2 M sodium malonate pH 4.0, 17% PEG 3350 |