5NX2
Crystal structure of thermostabilised full-length GLP-1R in complex with a truncated peptide agonist at 3.7 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96861 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 94.435, 94.435, 163.905 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.677 - 3.700 |
R-factor | 0.2872 |
Rwork | 0.285 |
R-free | 0.33410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3iol 5ee7 |
RMSD bond length | 0.004 |
RMSD bond angle | 1.021 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1-2575-000)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.600 | 4.050 |
High resolution limit [Å] | 3.700 | 3.700 |
Rmerge | 0.134 | 2.024 |
Rpim | 0.073 | 1.078 |
Number of reflections | 9266 | 2205 |
<I/σ(I)> | 6.6 | 1.2 |
Completeness [%] | 98.5 | 99.7 |
Redundancy | 6.6 | 6.9 |
CC(1/2) | 0.998 | 0.348 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 283 | 0.1M Tris-HCl pH 8.0-9.0, 32-44% (v/v) PEG 200 |