5NTD
Structure of Leucyl aminopeptidase from Trypanosoma brucei in complex with Bestatin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 87.260, 143.450, 268.030 |
Unit cell angles | 90.00, 95.54, 90.00 |
Refinement procedure
Resolution | 80.330 - 2.300 |
R-factor | 0.18995 |
Rwork | 0.189 |
R-free | 0.21375 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5nsk |
RMSD bond length | 0.015 |
RMSD bond angle | 1.475 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.330 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.091 | 0.523 |
Number of reflections | 290030 | |
<I/σ(I)> | 9.1 | 2.1 |
Completeness [%] | 99.7 | |
Redundancy | 3.9 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M HEPES pH 7.0, 40 % (v/v) MPD, 5 mM MnCl2, 5 mM bestatin |