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5NTD

Structure of Leucyl aminopeptidase from Trypanosoma brucei in complex with Bestatin

Functional Information from GO Data
ChainGOidnamespacecontents
A0004177molecular_functionaminopeptidase activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0006508biological_processproteolysis
A0008233molecular_functionpeptidase activity
A0019538biological_processprotein metabolic process
A0030145molecular_functionmanganese ion binding
A0046872molecular_functionmetal ion binding
A0070006molecular_functionmetalloaminopeptidase activity
B0004177molecular_functionaminopeptidase activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0006508biological_processproteolysis
B0008233molecular_functionpeptidase activity
B0019538biological_processprotein metabolic process
B0030145molecular_functionmanganese ion binding
B0046872molecular_functionmetal ion binding
B0070006molecular_functionmetalloaminopeptidase activity
C0004177molecular_functionaminopeptidase activity
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0006508biological_processproteolysis
C0008233molecular_functionpeptidase activity
C0019538biological_processprotein metabolic process
C0030145molecular_functionmanganese ion binding
C0046872molecular_functionmetal ion binding
C0070006molecular_functionmetalloaminopeptidase activity
D0004177molecular_functionaminopeptidase activity
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0006508biological_processproteolysis
D0008233molecular_functionpeptidase activity
D0019538biological_processprotein metabolic process
D0030145molecular_functionmanganese ion binding
D0046872molecular_functionmetal ion binding
D0070006molecular_functionmetalloaminopeptidase activity
E0004177molecular_functionaminopeptidase activity
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0006508biological_processproteolysis
E0008233molecular_functionpeptidase activity
E0019538biological_processprotein metabolic process
E0030145molecular_functionmanganese ion binding
E0046872molecular_functionmetal ion binding
E0070006molecular_functionmetalloaminopeptidase activity
F0004177molecular_functionaminopeptidase activity
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0006508biological_processproteolysis
F0008233molecular_functionpeptidase activity
F0019538biological_processprotein metabolic process
F0030145molecular_functionmanganese ion binding
F0046872molecular_functionmetal ion binding
F0070006molecular_functionmetalloaminopeptidase activity
G0004177molecular_functionaminopeptidase activity
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0006508biological_processproteolysis
G0008233molecular_functionpeptidase activity
G0019538biological_processprotein metabolic process
G0030145molecular_functionmanganese ion binding
G0046872molecular_functionmetal ion binding
G0070006molecular_functionmetalloaminopeptidase activity
H0004177molecular_functionaminopeptidase activity
H0005515molecular_functionprotein binding
H0005737cellular_componentcytoplasm
H0006508biological_processproteolysis
H0008233molecular_functionpeptidase activity
H0019538biological_processprotein metabolic process
H0030145molecular_functionmanganese ion binding
H0046872molecular_functionmetal ion binding
H0070006molecular_functionmetalloaminopeptidase activity
I0004177molecular_functionaminopeptidase activity
I0005515molecular_functionprotein binding
I0005737cellular_componentcytoplasm
I0006508biological_processproteolysis
I0008233molecular_functionpeptidase activity
I0019538biological_processprotein metabolic process
I0030145molecular_functionmanganese ion binding
I0046872molecular_functionmetal ion binding
I0070006molecular_functionmetalloaminopeptidase activity
J0004177molecular_functionaminopeptidase activity
J0005515molecular_functionprotein binding
J0005737cellular_componentcytoplasm
J0006508biological_processproteolysis
J0008233molecular_functionpeptidase activity
J0019538biological_processprotein metabolic process
J0030145molecular_functionmanganese ion binding
J0046872molecular_functionmetal ion binding
J0070006molecular_functionmetalloaminopeptidase activity
K0004177molecular_functionaminopeptidase activity
K0005515molecular_functionprotein binding
K0005737cellular_componentcytoplasm
K0006508biological_processproteolysis
K0008233molecular_functionpeptidase activity
K0019538biological_processprotein metabolic process
K0030145molecular_functionmanganese ion binding
K0046872molecular_functionmetal ion binding
K0070006molecular_functionmetalloaminopeptidase activity
L0004177molecular_functionaminopeptidase activity
L0005515molecular_functionprotein binding
L0005737cellular_componentcytoplasm
L0006508biological_processproteolysis
L0008233molecular_functionpeptidase activity
L0019538biological_processprotein metabolic process
L0030145molecular_functionmanganese ion binding
L0046872molecular_functionmetal ion binding
L0070006molecular_functionmetalloaminopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue EPE A 601
ChainResidue
ASER97
ALYS98
APHE99
ALYS135
AHOH921
CGLU73
CARG77
LGLU21
LEPE601

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 602
ChainResidue
ASER112
AARG113
AHOH876
EASN420
ETYR444

site_idAC3
Number of Residues5
Detailsbinding site for residue MN A 603
ChainResidue
AASP294
AASP371
AGLU373
AMN604
ABES605

site_idAC4
Number of Residues6
Detailsbinding site for residue MN A 604
ChainResidue
ALYS289
AASP294
AASP312
AGLU373
AMN603
ABES605

site_idAC5
Number of Residues18
Detailsbinding site for residue BES A 605
ChainResidue
ALYS289
AASP294
ALYS301
AMET309
AASP312
AASP371
AGLU373
ATHR401
ALEU402
ATHR403
AGLY404
ALEU463
AARG467
ATYR498
AMN603
AMN604
ABCT606
AHOH812

site_idAC6
Number of Residues7
Detailsbinding site for residue BCT A 606
ChainResidue
ALYS289
AALA372
AGLU373
AGLY374
AARG375
ALEU402
ABES605

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 B 601
ChainResidue
BSER112
BARG113
CASN420
CTYR444
CHOH832

site_idAC8
Number of Residues5
Detailsbinding site for residue MN B 602
ChainResidue
BASP294
BASP371
BGLU373
BMN603
BBES604

site_idAC9
Number of Residues6
Detailsbinding site for residue MN B 603
ChainResidue
BLYS289
BASP294
BASP312
BGLU373
BMN602
BBES604

site_idAD1
Number of Residues17
Detailsbinding site for residue BES B 604
ChainResidue
BLYS289
BASP294
BLYS301
BMET309
BASP312
BASP371
BGLU373
BTHR401
BLEU402
BTHR403
BGLY404
BLEU463
BARG467
BMN602
BMN603
BBCT605
BHOH784

site_idAD2
Number of Residues7
Detailsbinding site for residue BCT B 605
ChainResidue
BLYS289
BALA372
BGLU373
BGLY374
BARG375
BLEU402
BBES604

site_idAD3
Number of Residues5
Detailsbinding site for residue SO4 D 601
ChainResidue
DSER112
DARG113
DHOH924
FASN420
FTYR444

site_idAD4
Number of Residues5
Detailsbinding site for residue MN D 602
ChainResidue
DBES604
DASP294
DASP371
DGLU373
DMN603

site_idAD5
Number of Residues6
Detailsbinding site for residue MN D 603
ChainResidue
DLYS289
DASP294
DASP312
DGLU373
DMN602
DBES604

site_idAD6
Number of Residues18
Detailsbinding site for residue BES D 604
ChainResidue
DLYS289
DASP294
DLYS301
DMET309
DASP312
DASN369
DASP371
DGLU373
DTHR401
DLEU402
DTHR403
DGLY404
DARG467
DMN602
DMN603
DBCT605
DHOH722
DHOH727

site_idAD7
Number of Residues8
Detailsbinding site for residue BCT D 605
ChainResidue
DLYS289
DALA372
DGLU373
DGLY374
DARG375
DLEU402
DBES604
DHOH727

site_idAD8
Number of Residues5
Detailsbinding site for residue SO4 C 601
ChainResidue
BASN420
BTYR444
CSER112
CARG113
CHOH850

site_idAD9
Number of Residues5
Detailsbinding site for residue MN C 602
ChainResidue
CASP294
CASP371
CGLU373
CMN603
CBES604

site_idAE1
Number of Residues6
Detailsbinding site for residue MN C 603
ChainResidue
CLYS289
CASP294
CASP312
CGLU373
CMN602
CBES604

site_idAE2
Number of Residues16
Detailsbinding site for residue BES C 604
ChainResidue
CLYS289
CASP294
CLYS301
CMET309
CASP312
CASP371
CGLU373
CTHR401
CLEU402
CTHR403
CGLY404
CARG467
CMN602
CMN603
CBCT605
CHOH728

site_idAE3
Number of Residues7
Detailsbinding site for residue BCT C 605
ChainResidue
CLYS289
CALA372
CGLU373
CGLY374
CARG375
CLEU402
CBES604

site_idAE4
Number of Residues7
Detailsbinding site for residue EPE E 601
ChainResidue
AASN420
AGLU421
ATYR444
ATHR488
ESER112
EARG113
EHOH712

site_idAE5
Number of Residues5
Detailsbinding site for residue MN E 602
ChainResidue
EASP294
EASP371
EGLU373
EMN603
EBES604

site_idAE6
Number of Residues6
Detailsbinding site for residue MN E 603
ChainResidue
ELYS289
EASP294
EASP312
EGLU373
EMN602
EBES604

site_idAE7
Number of Residues16
Detailsbinding site for residue BES E 604
ChainResidue
ELYS289
EASP294
ELYS301
EMET309
EASP312
EASP371
EGLU373
ETHR401
ELEU402
ETHR403
EGLY404
EARG467
EMN602
EMN603
EBCT605
EHOH775

site_idAE8
Number of Residues7
Detailsbinding site for residue BCT E 605
ChainResidue
ELYS289
EALA372
EGLU373
EGLY374
EARG375
ELEU402
EBES604

site_idAE9
Number of Residues5
Detailsbinding site for residue SO4 F 601
ChainResidue
DASN420
DTYR444
FSER112
FARG113
FHOH766

site_idAF1
Number of Residues5
Detailsbinding site for residue MN F 602
ChainResidue
FASP294
FASP371
FGLU373
FMN603
FBES604

site_idAF2
Number of Residues6
Detailsbinding site for residue MN F 603
ChainResidue
FLYS289
FASP294
FASP312
FGLU373
FMN602
FBES604

site_idAF3
Number of Residues16
Detailsbinding site for residue BES F 604
ChainResidue
FLYS289
FASP294
FLYS301
FASP312
FASP371
FGLU373
FTHR401
FLEU402
FTHR403
FGLY404
FLEU463
FARG467
FMN602
FMN603
FBCT605
FHOH708

site_idAF4
Number of Residues7
Detailsbinding site for residue BCT F 605
ChainResidue
FLYS289
FALA372
FGLU373
FGLY374
FARG375
FLEU402
FBES604

site_idAF5
Number of Residues5
Detailsbinding site for residue SO4 G 601
ChainResidue
GSER112
GARG113
GHOH849
KASN420
KTYR444

site_idAF6
Number of Residues5
Detailsbinding site for residue MN G 602
ChainResidue
GASP294
GASP371
GGLU373
GMN603
GBES604

site_idAF7
Number of Residues6
Detailsbinding site for residue MN G 603
ChainResidue
GLYS289
GASP294
GASP312
GGLU373
GMN602
GBES604

site_idAF8
Number of Residues17
Detailsbinding site for residue BES G 604
ChainResidue
GLYS289
GASP294
GLYS301
GMET309
GASP312
GASP371
GGLU373
GTHR401
GLEU402
GTHR403
GGLY404
GLEU463
GARG467
GMN602
GMN603
GBCT605
GHOH750

site_idAF9
Number of Residues6
Detailsbinding site for residue BCT G 605
ChainResidue
GALA372
GGLU373
GGLY374
GARG375
GLEU402
GBES604

site_idAG1
Number of Residues5
Detailsbinding site for residue SO4 H 601
ChainResidue
HSER112
HARG113
HHOH841
JASN420
JTYR444

site_idAG2
Number of Residues5
Detailsbinding site for residue MN H 602
ChainResidue
HASP294
HASP371
HGLU373
HMN603
HBES604

site_idAG3
Number of Residues6
Detailsbinding site for residue MN H 603
ChainResidue
HLYS289
HASP294
HASP312
HGLU373
HMN602
HBES604

site_idAG4
Number of Residues16
Detailsbinding site for residue BES H 604
ChainResidue
HLYS289
HASP294
HLYS301
HMET309
HASP312
HASP371
HGLU373
HTHR401
HLEU402
HTHR403
HGLY404
HLEU463
HMN602
HMN603
HBCT605
HHOH709

site_idAG5
Number of Residues7
Detailsbinding site for residue BCT H 605
ChainResidue
HLYS289
HALA372
HGLU373
HGLY374
HARG375
HLEU402
HBES604

site_idAG6
Number of Residues3
Detailsbinding site for residue SO4 I 601
ChainResidue
IARG113
LASN420
LTYR444

site_idAG7
Number of Residues5
Detailsbinding site for residue MN I 602
ChainResidue
IASP294
IASP371
IGLU373
IMN603
IBES604

site_idAG8
Number of Residues6
Detailsbinding site for residue MN I 603
ChainResidue
ILYS289
IASP294
IASP312
IGLU373
IMN602
IBES604

site_idAG9
Number of Residues16
Detailsbinding site for residue BES I 604
ChainResidue
ILYS289
IASP294
ILYS301
IMET309
IASP312
IASP371
IGLU373
ITHR401
ILEU402
ITHR403
IGLY404
IARG467
IMN602
IMN603
IBCT605
IHOH751

site_idAH1
Number of Residues7
Detailsbinding site for residue BCT I 605
ChainResidue
IASP371
IALA372
IGLU373
IGLY374
IARG375
ILEU402
IBES604

site_idAH2
Number of Residues5
Detailsbinding site for residue SO4 J 601
ChainResidue
HASN420
HTYR444
JSER112
JARG113
JHOH855

site_idAH3
Number of Residues5
Detailsbinding site for residue MN J 602
ChainResidue
JASP294
JASP371
JGLU373
JMN603
JBES604

site_idAH4
Number of Residues6
Detailsbinding site for residue MN J 603
ChainResidue
JLYS289
JASP294
JASP312
JGLU373
JMN602
JBES604

site_idAH5
Number of Residues16
Detailsbinding site for residue BES J 604
ChainResidue
JLYS289
JASP294
JLYS301
JASP312
JASP371
JGLU373
JTHR401
JLEU402
JTHR403
JGLY404
JLEU463
JARG467
JMN602
JMN603
JBCT605
JHOH770

site_idAH6
Number of Residues7
Detailsbinding site for residue BCT J 605
ChainResidue
JLYS289
JALA372
JGLU373
JGLY374
JARG375
JLEU402
JBES604

site_idAH7
Number of Residues5
Detailsbinding site for residue SO4 K 601
ChainResidue
GASN420
GTYR444
KSER112
KARG113
KHOH870

site_idAH8
Number of Residues5
Detailsbinding site for residue MN K 602
ChainResidue
KASP294
KASP371
KGLU373
KMN603
KBES604

site_idAH9
Number of Residues6
Detailsbinding site for residue MN K 603
ChainResidue
KLYS289
KASP294
KASP312
KGLU373
KMN602
KBES604

site_idAI1
Number of Residues16
Detailsbinding site for residue BES K 604
ChainResidue
KLYS289
KASP294
KLYS301
KMET309
KASP312
KASP371
KGLU373
KTHR401
KLEU402
KTHR403
KGLY404
KLEU463
KMN602
KMN603
KBCT605
KHOH739

site_idAI2
Number of Residues7
Detailsbinding site for residue BCT K 605
ChainResidue
KLYS289
KALA372
KGLU373
KGLY374
KARG375
KLEU402
KBES604

site_idAI3
Number of Residues10
Detailsbinding site for residue EPE L 601
ChainResidue
AALA95
AGLY96
AEPE601
LGLU21
LLYS23
LGLU200
LALA201
LTHR204
LARG328
LHOH701

site_idAI4
Number of Residues3
Detailsbinding site for residue SO4 L 602
ChainResidue
IASN420
LSER112
LARG113

site_idAI5
Number of Residues5
Detailsbinding site for residue MN L 603
ChainResidue
LASP294
LASP371
LGLU373
LMN604
LBES605

site_idAI6
Number of Residues6
Detailsbinding site for residue MN L 604
ChainResidue
LLYS289
LASP294
LASP312
LGLU373
LMN603
LBES605

site_idAI7
Number of Residues16
Detailsbinding site for residue BES L 605
ChainResidue
LLYS289
LASP294
LLYS301
LMET309
LASP312
LASP371
LGLU373
LTHR401
LLEU402
LTHR403
LGLY404
LLEU463
LMN603
LMN604
LBCT606
LHOH739

site_idAI8
Number of Residues6
Detailsbinding site for residue BCT L 606
ChainResidue
LALA372
LGLU373
LGLY374
LARG375
LLEU402
LBES605

Functional Information from PROSITE/UniProt
site_idPS00631
Number of Residues8
DetailsCYTOSOL_AP Cytosol aminopeptidase signature. NTDAEGRI
ChainResidueDetails
AASN369-ILE376

227111

PDB entries from 2024-11-06

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