5NRW
Crystal structure of the human bromodomain of CREBBP bound to the inhibitor XDM4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-02-21 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 90.030, 34.130, 40.290 |
Unit cell angles | 90.00, 92.65, 90.00 |
Refinement procedure
Resolution | 44.970 - 1.700 |
R-factor | 0.2218 |
Rwork | 0.219 |
R-free | 0.25990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dwy |
RMSD bond length | 0.010 |
RMSD bond angle | 1.514 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.17) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.970 | 44.970 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.066 | 0.084 | 0.138 |
Rmeas | 0.084 | 0.106 | 0.177 |
Rpim | 0.051 | 0.064 | 0.108 |
Number of reflections | 12221 | ||
<I/σ(I)> | 10.2 | ||
Completeness [%] | 89.9 | 81.1 | 91.9 |
Redundancy | 2.4 | 2.4 | 2.3 |
CC(1/2) | 0.989 | 0.959 | 0.924 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 277 | LiSO4, PEG 3350, ethylene glycol |