Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NFN

JMJD7 IN COMPLEX WITH MN AND 2OG IN THE H32 FORM

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2014-07-11
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameH 3 2
Unit cell lengths207.220, 207.220, 211.788
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.459 - 2.982
R-factor0.24
Rwork0.249
R-free0.25080
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.450
Data reduction softwareHKL-2000 (706E)
Data scaling softwareHKL-2000 (706E)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4593.070
High resolution limit [Å]2.9802.980
Rmerge0.1691.296
Number of reflections35671
<I/σ(I)>10.31.5
Completeness [%]100.0100
Redundancy1514.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.629825 mg/mL His6-JMJD7, 2 mM MnCl2, 4 mM 2OG, 1.5 M Sodium Nitrate, 0.1 M Sodium Acetate pH 4.6

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon