5N4B
Prolyl oligopeptidase B from Galerina marginata bound to 25mer macrocyclization substrate - S577A mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-18 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.961 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 99.084, 114.716, 141.265 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.561 - 1.440 |
R-factor | 0.1566 |
Rwork | 0.155 |
R-free | 0.18140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h2z |
RMSD bond length | 0.013 |
RMSD bond angle | 1.216 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11rc2_2522: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 100.000 |
High resolution limit [Å] | 1.440 |
Rmerge | 0.114 |
Number of reflections | 288485 |
<I/σ(I)> | 9.26 |
Completeness [%] | 99.7 |
Redundancy | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293.15 | 28% PEG6000, 100 mM Bicine pH 9.0, 60 mM Magnesium formate, and 2.42% DMSO, 12.5mM Hexammine cobalt chloride, cryoprotected with 12% glycerol |