5MXA
Structure of unbound Interleukin-23
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976 |
Spacegroup name | P 61 |
Unit cell lengths | 109.849, 109.849, 87.735 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 64.495 - 2.501 |
R-factor | 0.1914 |
Rwork | 0.188 |
R-free | 0.22870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | IL-23 from pdb 4OE8 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.730 |
Data reduction software | XDS (20161205) |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2614: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 87.690 | 2.650 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmeas | 0.066 | 1.031 |
Number of reflections | 20825 | 3297 |
<I/σ(I)> | 24.59 | 2.24 |
Completeness [%] | 99.7 | 98.2 |
Redundancy | 10.27 | 10.14 |
CC(1/2) | 1.000 | 0.731 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.3 | 287.15 | 100 mM citrate, 100 mM sodium phosphate, 20.5 % PEG 1000, 200 mM lithium sulphate |