5MSG
Influenza B polymerase bound to vRNA promoter and capped RNA primer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-02 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.2724 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 200.410, 200.410, 254.610 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 173.560 - 3.800 |
R-factor | 0.23631 |
Rwork | 0.235 |
R-free | 0.26745 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wrt |
RMSD bond length | 0.007 |
RMSD bond angle | 0.996 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 173.560 | 4.000 |
High resolution limit [Å] | 3.800 | 3.800 |
Rmerge | 0.411 | 2.743 |
Number of reflections | 58685 | |
<I/σ(I)> | 9.76 | 1.2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 46.4 | 4.1 |
CC(1/2) | 0.999 | 0.720 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 277 | 35 microM of FluB polymerase was mixed with 40 microM of the vRNA promoter and 40 microM 13-mer capped RNA primer in a buffer containing 500 mM NaCl, 50 mM HEPES pH 7.5, 5% glycerol and 2 mM TCEP. The best diffracting crystals appeared in 100 mM sodium acetate pH 3.8 - 4.0 and 150 mM di-ammonium phosphate |