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5MHA

D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with a mixture of 2-ketohexanoic acid and 2-hydroxyhexanoic acid, and NADPH (1.57 A resolution)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2010-07-02
DetectorADSC QUANTUM 315
Wavelength(s)0.9763
Spacegroup nameP 1 21 1
Unit cell lengths62.540, 76.300, 66.990
Unit cell angles90.00, 97.04, 90.00
Refinement procedure
Resolution38.150 - 1.570
R-factor0.17571
Rwork0.174
R-free0.21602
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.549
Data reduction softwareiMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.1501.610
High resolution limit [Å]1.5701.570
Rmerge0.0390.397
Number of reflections81835
<I/σ(I)>13.62.2
Completeness [%]94.893.7
Redundancy2.12.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8290Protein buffer: 20 mM Tris_HCl pH8, 3 mM EDTA and 1 M NaCl Crystallisation conditions: 0.1 M Tris-HCl pH8, 0.5 M Mg acetate and 24 % PEG3350 Ligands: 5 mM NADPH and 50 mM 2-ketohexanoic acid

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PDB entries from 2024-11-13

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