5MER
Human Leukocyte Antigen A02 presenting ILAKFLHEL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 118.970, 170.280, 45.710 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.060 - 1.880 |
R-factor | 0.1863 |
Rwork | 0.184 |
R-free | 0.22430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4i4w |
RMSD bond length | 0.019 |
RMSD bond angle | 1.967 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 34.060 | 34.060 | 1.930 |
High resolution limit [Å] | 1.880 | 8.410 | 1.880 |
Rmerge | 0.108 | 0.047 | 0.666 |
Rpim | 0.044 | ||
Total number of observations | 545975 | ||
Number of reflections | 76630 | ||
<I/σ(I)> | 10.8 | 22.1 | 3.2 |
Completeness [%] | 99.9 | 98.4 | 100 |
Redundancy | 7.1 | 6.3 | 7.6 |
CC(1/2) | 0.997 | 0.998 | 0.913 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M ammonium sulphate, 0.1M MES pH7, 25% PEG 8000 |