5MEP
Human Leukocyte Antigen A02 presenting ILGKFLHWL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-09 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 119.410, 169.550, 47.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.390 - 2.710 |
R-factor | 0.1849 |
Rwork | 0.182 |
R-free | 0.23940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4i4w |
RMSD bond length | 0.013 |
RMSD bond angle | 1.658 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.390 | 42.390 | 2.780 |
High resolution limit [Å] | 2.710 | 12.120 | 2.710 |
Rmerge | 0.113 | 0.053 | 0.905 |
Rpim | 0.045 | ||
Total number of observations | 195005 | ||
Number of reflections | 26894 | ||
<I/σ(I)> | 14.1 | 32.3 | 2.3 |
Completeness [%] | 100.0 | 98.4 | 100 |
Redundancy | 7.3 | 6.2 | 7.1 |
CC(1/2) | 0.997 | 0.998 | 0.714 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M ammonium sulphate, 0.1M MES pH7, 15% PEG 8000 |