5LQQ
Structure of Autotaxin (ENPP2) with LM350
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-25 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.97925 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.655, 89.067, 77.509 |
Unit cell angles | 90.00, 102.88, 90.00 |
Refinement procedure
Resolution | 46.000 - 2.400 |
R-factor | 0.2194 |
Rwork | 0.217 |
R-free | 0.26210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xr9 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.207 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.26) |
Phasing software | PHASER (2.6.1) |
Refinement software | REFMAC (refmac_5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.000 | 46.000 | 2.490 |
High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
Rmerge | 0.074 | 0.023 | 0.655 |
Rmeas | 0.090 | ||
Rpim | 0.050 | ||
Total number of observations | 98094 | ||
Number of reflections | 32432 | ||
<I/σ(I)> | 12.9 | ||
Completeness [%] | 99.6 | 98.8 | 99.4 |
Redundancy | 3 | 3.1 | 3 |
CC(1/2) | 0.998 | 0.999 | 0.784 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 22% PEG 3350, NH4I (0.2M), NaSCN (0.1M) |