5LF1
Human 20S proteasome complex with Dihydroeponemycin at 2.0 Angstrom
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 113.890, 203.490, 316.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 171.090 - 2.000 |
R-factor | 0.1796 |
Rwork | 0.178 |
R-free | 0.21275 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5le5 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.724 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 171.090 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.094 | |
Number of reflections | 464668 | |
<I/σ(I)> | 12.2 | 1 |
Completeness [%] | 99.5 | 98.3 |
Redundancy | 9.43 | |
CC(1/2) | 1.000 | 0.390 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1 M Bis-Tris, 0.2 M Magnesium Chloride, 10 % PEG3350 |