5LC0
Crystal structure of Zika virus NS2B-NS3 protease in complex with a boronate inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-14 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.03320 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 125.808, 125.808, 73.461 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 62.900 - 2.700 |
R-factor | 0.20665 |
Rwork | 0.204 |
R-free | 0.26332 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yol |
RMSD bond length | 0.010 |
RMSD bond angle | 1.622 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.460 | 2.850 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.072 | 0.793 |
Number of reflections | 18733 | |
<I/σ(I)> | 19.5 | 2.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 9.2 | 9.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 1.5 M lithium sulfate monohydrate, 0.1 M sodium acetate trihydrate, pH 4.8. |