Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LA9

HIF prolyl hydroxylase 2 (PHD2-R281C/V314C) cross-linked to HIF-1alpha NODD-L397C/D412C and N-oxalylglycine (NOG) (complex-2)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2011-11-04
DetectorADSC QUANTUM 315r
Wavelength(s)0.9795
Spacegroup nameP 21 21 2
Unit cell lengths88.467, 97.329, 71.001
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.129 - 2.813
R-factor0.2525
Rwork0.251
R-free0.27850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3hqr
RMSD bond length0.003
RMSD bond angle0.612
Data reduction softwareHKL-2000 (706E)
Data scaling softwareHKL-2000 (706E)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1292.900
High resolution limit [Å]2.8102.810
Rmerge0.2451.250
Number of reflections15152
<I/σ(I)>4.77691.7378
Completeness [%]98.599.3
Redundancy3.43.5
CC(1/2)0.993
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52930.1 M HEPES pH 7.5, 2.0 M ammonium sulfate

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon