5L9V
HIF prolyl hydroxylase 2 (PHD2-R281C/P317C) cross-linked to HIF-1alpha NODD-L397C/D412C and N-oxalylglycine (NOG) (complex-1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-04 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.807, 73.088, 70.407 |
Unit cell angles | 90.00, 91.17, 90.00 |
Refinement procedure
Resolution | 43.798 - 1.829 |
R-factor | 0.1705 |
Rwork | 0.169 |
R-free | 0.19040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hqr |
RMSD bond length | 0.005 |
RMSD bond angle | 0.711 |
Data reduction software | HKL-2000 (706E) |
Data scaling software | HKL-2000 (706E) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.798 | 1.900 |
High resolution limit [Å] | 1.829 | 1.829 |
Rmerge | 0.101 | 0.908 |
Number of reflections | 38965 | |
<I/σ(I)> | 11.3375 | 2 |
Completeness [%] | 99.7 | 100 |
Redundancy | 3.6 | 3.7 |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.2 M ammonium chloride, 20 % w/v polyethylene glycol 3350 |