5KZY
Crystal structure of the xenopus Smoothened cysteine-rich domain (CRD) in complex with cyclopamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-26 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.725, 54.592, 51.863 |
Unit cell angles | 90.00, 96.44, 90.00 |
Refinement procedure
Resolution | 37.475 - 2.484 |
R-factor | 0.2198 |
Rwork | 0.217 |
R-free | 0.27650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5kzv |
RMSD bond length | 0.003 |
RMSD bond angle | 1.065 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.484 | 6.780 | 2.484 |
Rmerge | 0.120 | 0.101 | 0.746 |
Number of reflections | 8483 | ||
<I/σ(I)> | 12.1 | ||
Completeness [%] | 97.5 | 91.2 | 89.7 |
Redundancy | 3.4 | 3.3 | 2.4 |
CC(1/2) | 0.973 | 0.538 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 0.1M HEPES and 25% PEG 3350 |