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5KZY

Crystal structure of the xenopus Smoothened cysteine-rich domain (CRD) in complex with cyclopamine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-08-26
DetectorADSC QUANTUM 315r
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths43.725, 54.592, 51.863
Unit cell angles90.00, 96.44, 90.00
Refinement procedure
Resolution37.475 - 2.484
R-factor0.2198
Rwork0.217
R-free0.27650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5kzv
RMSD bond length0.003
RMSD bond angle1.065
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.540
High resolution limit [Å]2.4846.7802.484
Rmerge0.1200.1010.746
Number of reflections8483
<I/σ(I)>12.1
Completeness [%]97.591.289.7
Redundancy3.43.32.4
CC(1/2)0.9730.538
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52950.1M HEPES and 25% PEG 3350

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