5KE8
mouse Klf4 E446P ZnF1-3 and MpG/MpG sequence DNA complex structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-04 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 50.450, 50.450, 130.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.674 - 2.450 |
R-factor | 0.233 |
Rwork | 0.229 |
R-free | 0.26970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m9e |
RMSD bond length | 0.005 |
RMSD bond angle | 0.698 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2400: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.674 | 2.510 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.060 | 0.201 |
Number of reflections | 4805 | |
<I/σ(I)> | 17.88 | 6.31 |
Completeness [%] | 71.7 | 4.8 |
Redundancy | 3.8 | 4.5 |
CC(1/2) | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 289 | 0.1M Tris-HCl pH8.5 , 0.25M NaCl and 20% polyethylene glycol 8000 |