5JWA
the structure of malaria PfNDH2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-01-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | I 41 |
Unit cell lengths | 191.670, 191.670, 91.388 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.177 - 2.162 |
R-factor | 0.1902 |
Rwork | 0.188 |
R-free | 0.22840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g6g |
RMSD bond length | 0.008 |
RMSD bond angle | 1.160 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHAS |
Refinement software | PHENIX (phenix.refine: 1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.200 |
High resolution limit [Å] | 2.160 | 5.860 | 2.160 |
Rmerge | 0.080 | 0.040 | 0.837 |
Number of reflections | 87149 | ||
<I/σ(I)> | 11.8 | ||
Completeness [%] | 98.4 | 98.2 | 96.7 |
Redundancy | 6.2 | 6.3 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | protein(10mg/ml) reservoir solution (2.7M sodium acetate trihydrate, pH screen kit from Hampoton Research at 4.8 or 10.0 to 10.0 to 10.6) |