5JT2
BRAFV600E Kinase Domain In Complex with Chemically Linked Vemurafenib Inhibitor VEM-BISAMIDE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-07 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.102, 68.442, 275.603 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.585 - 2.702 |
R-factor | 0.2158 |
Rwork | 0.212 |
R-free | 0.27290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jsm |
RMSD bond length | 0.009 |
RMSD bond angle | 1.278 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.750 |
High resolution limit [Å] | 2.700 | 7.320 | 2.700 |
Rmerge | 0.099 | 0.055 | 0.540 |
Rmeas | 0.110 | 0.062 | 0.592 |
Rpim | 0.046 | 0.028 | 0.240 |
Total number of observations | 192419 | ||
Number of reflections | 34678 | ||
<I/σ(I)> | 8.2 | ||
Completeness [%] | 99.6 | 95.6 | 99.9 |
Redundancy | 5.5 | 4.8 | 5.8 |
CC(1/2) | 0.996 | 0.862 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 100mM Tris pH 8.5 5% Ethanol 2% Benzamidine HCl |