5ITX
Crystal Structure of Human NEIL1(P2G R242K) bound to duplex DNA containing Thymine Glycol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-09-01 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.991, 109.378, 170.968 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 92.140 - 2.650 |
R-factor | 0.19431 |
Rwork | 0.192 |
R-free | 0.23544 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1tdh |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 92.140 | 2.700 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.087 | |
Number of reflections | 38781 | |
<I/σ(I)> | 22.36 | |
Completeness [%] | 99.3 | |
Redundancy | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 277 | 0.1 M cacodylic acid (pH 7.0), 0.1 M NaCl, 0.05 M MgCl2 and 24% (w/v) PEG 8000 |